Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC114849046 | stx17 | ENSBSLP00000035955 | ENSBSLP00000056542 | Transforming growth factor-beta receptor-associated protein 1-like. | Syntaxin 17. | 0.804 |
LOC114849046 | vps11 | ENSBSLP00000035955 | ENSBSLP00000011459 | Transforming growth factor-beta receptor-associated protein 1-like. | VPS11 core subunit of CORVET and HOPS complexes. | 0.990 |
LOC114849046 | vps16 | ENSBSLP00000035955 | ENSBSLP00000019285 | Transforming growth factor-beta receptor-associated protein 1-like. | VPS16 core subunit of CORVET and HOPS complexes. | 0.990 |
LOC114849046 | vps18 | ENSBSLP00000035955 | ENSBSLP00000045634 | Transforming growth factor-beta receptor-associated protein 1-like. | VPS18 core subunit of CORVET and HOPS complexes. | 0.989 |
LOC114849046 | vps33a | ENSBSLP00000035955 | ENSBSLP00000053932 | Transforming growth factor-beta receptor-associated protein 1-like. | VPS33A core subunit of CORVET and HOPS complexes. | 0.970 |
LOC114849046 | vps33b | ENSBSLP00000035955 | ENSBSLP00000031805 | Transforming growth factor-beta receptor-associated protein 1-like. | VPS33B late endosome and lysosome associated. | 0.970 |
LOC114849046 | vps39 | ENSBSLP00000035955 | ENSBSLP00000055929 | Transforming growth factor-beta receptor-associated protein 1-like. | VPS39 subunit of HOPS complex. | 0.943 |
LOC114849046 | vps41 | ENSBSLP00000035955 | ENSBSLP00000020313 | Transforming growth factor-beta receptor-associated protein 1-like. | VPS41 subunit of HOPS complex. | 0.987 |
LOC114849046 | vps8 | ENSBSLP00000035955 | ENSBSLP00000024891 | Transforming growth factor-beta receptor-associated protein 1-like. | VPS8 subunit of CORVET complex. | 0.985 |
stx17 | LOC114849046 | ENSBSLP00000056542 | ENSBSLP00000035955 | Syntaxin 17. | Transforming growth factor-beta receptor-associated protein 1-like. | 0.804 |
stx17 | tgfbrap1 | ENSBSLP00000056542 | ENSBSLP00000011874 | Syntaxin 17. | Transforming growth factor beta receptor associated protein 1. | 0.804 |
stx17 | vps11 | ENSBSLP00000056542 | ENSBSLP00000011459 | Syntaxin 17. | VPS11 core subunit of CORVET and HOPS complexes. | 0.987 |
stx17 | vps16 | ENSBSLP00000056542 | ENSBSLP00000019285 | Syntaxin 17. | VPS16 core subunit of CORVET and HOPS complexes. | 0.994 |
stx17 | vps18 | ENSBSLP00000056542 | ENSBSLP00000045634 | Syntaxin 17. | VPS18 core subunit of CORVET and HOPS complexes. | 0.989 |
stx17 | vps33a | ENSBSLP00000056542 | ENSBSLP00000053932 | Syntaxin 17. | VPS33A core subunit of CORVET and HOPS complexes. | 0.984 |
stx17 | vps33b | ENSBSLP00000056542 | ENSBSLP00000031805 | Syntaxin 17. | VPS33B late endosome and lysosome associated. | 0.980 |
stx17 | vps39 | ENSBSLP00000056542 | ENSBSLP00000055929 | Syntaxin 17. | VPS39 subunit of HOPS complex. | 0.998 |
stx17 | vps41 | ENSBSLP00000056542 | ENSBSLP00000020313 | Syntaxin 17. | VPS41 subunit of HOPS complex. | 0.997 |
stx17 | vps8 | ENSBSLP00000056542 | ENSBSLP00000024891 | Syntaxin 17. | VPS8 subunit of CORVET complex. | 0.450 |
tgfbrap1 | stx17 | ENSBSLP00000011874 | ENSBSLP00000056542 | Transforming growth factor beta receptor associated protein 1. | Syntaxin 17. | 0.804 |
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