STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pighPhosphatidylinositol glycan anchor biosynthesis class H. (180 aa)    
Predicted Functional Partners:
piga
Phosphatidylinositol glycan anchor biosynthesis class A.
    
 0.981
pigp
Phosphatidylinositol glycan anchor biosynthesis class P.
    
 0.976
pigc
Phosphatidylinositol glycan anchor biosynthesis class C.
   
 0.975
pigq
Phosphatidylinositol glycan anchor biosynthesis class Q.
    
 0.973
dpm2
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
    
 0.971
pyurf
PIGY upstream reading frame.
     
 0.965
pigl
Phosphatidylinositol glycan anchor biosynthesis class L.
   
 
 0.930
pigw
Phosphatidylinositol glycan anchor biosynthesis class W.
    
 0.930
tm2d2
TM2 domain containing 2.
   
 
 0.851
tm2d3
TM2 domain containing 3.
   
 
 0.809
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.