STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114846181Ran GTPase-activating protein 1-like. (566 aa)    
Predicted Functional Partners:
LOC114846828
ranBP2-like and GRIP domain-containing protein 3.
   
 0.999
ranbp1
RAN binding protein 1.
   
 0.985
sumo1
Small ubiquitin like modifier 1.
    
 0.969
ran
RAN, member RAS oncogene family.
   
 0.962
adgrd1
Adhesion G protein-coupled receptor D1.
   
 0.962
ube2i
Ubiquitin conjugating enzyme E2 I.
   
 0.959
LOC114860313
SUMO-conjugating enzyme UBC9-like.
   
 0.958
kctd2
Potassium channel tetramerization domain containing 2.
   
 0.899
ENSBSLP00000040395
annotation not available
   
 0.883
GCC2
GRIP and coiled-coil domain containing 2.
   
 0.883
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.