STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rundc3bRUN domain containing 3B. (448 aa)    
Predicted Functional Partners:
uvrag
UV radiation resistance associated.
    
 0.822
ap2s1
Adaptor related protein complex 2 subunit sigma 1.
    
   0.559
slc25a40
Solute carrier family 25 member 40.
      
 0.553
acbd7
acyl-CoA binding domain containing 7.
      
 0.528
dmtf1
Cyclin D binding myb like transcription factor 1.
      
 0.527
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.495
vps45
Vacuolar protein sorting 45 homolog.
     
 0.480
rubcn
Rubicon autophagy regulator.
     
 0.466
becn1
Beclin 1.
    
 
 0.464
LOC114842415
Multidrug resistance protein 1-like.
   
  
 0.453
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.