STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114866245Thyroid hormone receptor-associated protein 3-like. (905 aa)    
Predicted Functional Partners:
pnn
Pinin, desmosome associated protein.
   
 0.896
eif4a3
Eukaryotic translation initiation factor 4A3.
   
  0.872
med1
Mediator complex subunit 1.
   
  0.869
LOC114853360
Protein mago nashi homolog.
   
 0.865
rbm8a
RNA binding motif protein 8A.
   
 0.851
med14
Mediator complex subunit 14.
     
 0.840
casc3
CASC3 exon junction complex subunit.
   
  0.837
tdrd3
Tudor domain containing 3.
    
  0.828
med24
Mediator complex subunit 24.
    
 0.825
med7
Mediator complex subunit 7.
    
  0.822
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.