STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114846167Lethal(3)malignant brain tumor-like protein 2. (848 aa)    
Predicted Functional Partners:
meaf6
MYST/Esa1 associated factor 6.
    
 0.899
ruvbl2
RuvB like AAA ATPase 2.
   
 0.899
mrgbp
MRG domain binding protein.
    
 0.894
RING1
Ring finger protein 1.
    
 0.893
rnf2
Ring finger protein 2.
    
 0.893
LOC114849205
Uncharacterized LOC114849205.
    
 0.892
ENSBSLP00000026842
annotation not available
    
 0.892
yeats4
YEATS domain containing 4.
   
  0.891
pcgf6
Polycomb group ring finger 6.
    
 0.884
ENSBSLP00000015615
annotation not available
   
 0.875
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.