STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114849614Zinc finger FYVE domain-containing protein 1-like. (789 aa)    
Predicted Functional Partners:
LOC114852798
Intersectin-2-like.
    
 0.986
itsn2
Intersectin 2.
    
 0.986
uevld
UEV and lactate/malate dehyrogenase domains.
    
 0.981
rps27a
Ribosomal protein S27a.
    
  0.939
tm9sf1
Transmembrane 9 superfamily member 1.
   
 0.920
stam2
Signal transducing adaptor molecule 2.
   
 0.906
stam
Signal transducing adaptor molecule.
   
 0.906
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.851
LOC114867825
Zinc finger FYVE domain-containing protein 1-like.
  
  
 
0.841
ZFYVE1
Zinc finger FYVE domain-containing protein 1-like.
  
  
 
0.839
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.