STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114850374Lecithin retinol acyltransferase-like. (236 aa)    
Predicted Functional Partners:
LOC114845854
Inactive all-trans-retinol 13,14-reductase-like.
     
 0.823
retsat
Retinol saturase.
     
 0.823
rdh10
Retinol dehydrogenase 10.
     
 0.823
LOC114846450
Cytochrome P450 26A1.
   
 
 0.821
sdr16c5
Short chain dehydrogenase/reductase family 16C member 5.
     
 0.819
LOC114844894
Retinoid isomerohydrolase.
     
 0.803
DHRS9
Retinol dehydrogenase 7-like.
     
 0.798
RDH8
Retinol dehydrogenase 8-like.
     
 0.798
LOC114860522
Retinol dehydrogenase 8-like.
     
 0.798
rdh5
Retinol dehydrogenase 5.
     
 0.798
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.