STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114845555Golgi apparatus membrane protein TVP23 homolog B-like. (201 aa)    
Predicted Functional Partners:
ulk2
Unc-51 like autophagy activating kinase 2.
    
   0.851
LOC114862946
Serine/threonine-protein kinase ULK1-like.
    
   0.851
ulk1
Unc-51 like autophagy activating kinase 1.
    
   0.851
LOC114860015
Protein YIPF2-like.
   
 
 0.720
yipf1
Yip1 domain family member 1.
   
 
 0.720
yipf3
Yip1 domain family member 3.
   
 
 0.702
LOC114856125
Serine/threonine-protein kinase 35-like.
    
   0.650
LOC114850197
Serine/threonine-protein kinase PDIK1L-like.
    
   0.650
LOC114858970
Serine/threonine-protein kinase 35-like.
    
   0.650
LOC114865664
Serine/threonine-protein kinase pdik1l.
    
   0.650
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.