STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114863280Coiled-coil domain-containing protein 157-like. (558 aa)    
Predicted Functional Partners:
fam124a
Family with sequence similarity 124 member A.
   
    0.627
serpine3
Serpin family E member 3.
   
    0.627
LOC114868727
Protein FAM124B-like.
   
    0.592
fxr1
FMR1 autosomal homolog 1.
    
 
 0.474
fmr1
FMRP translational regulator 1.
    
 
 0.474
LOC114867071
Fragile X mental retardation syndrome-related protein 1-like.
    
 
 0.474
HGFAC
HGF activator.
    
  0.433
habp2
Hyaluronan binding protein 2.
    
  0.433
ENSBSLP00000001361
Microtubule-associated protein 1 light chain 3 alpha.
    
 0.419
LOC114864411
Microtubule-associated proteins 1A/1B light chain 3C-like.
    
 0.419
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.