STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pemtPhosphatidylethanolamine N-methyltransferase. (251 aa)    
Predicted Functional Partners:
pisd
Phosphatidylserine decarboxylase.
   
 0.937
cept1
Choline/ethanolamine phosphotransferase 1.
    
 0.930
kmo
Kynurenine 3-monooxygenase.
   
 
 0.924
LOC114857615
Phosphatidylcholine-sterol acyltransferase-like.
   
 0.919
chpt1
Choline phosphotransferase 1.
    
 0.915
selenoi
Selenoprotein I.
    
 0.907
chdh
Choline dehydrogenase.
   
 
 0.904
LOC114856852
Group XV phospholipase A2-like.
   
 0.896
LOC114849988
Membrane-bound O-acyltransferase domain-containing protein 2-like.
    
 0.888
LOC114848016
Lysophospholipid acyltransferase 2-like.
    
 0.888
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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