STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114870425WASH complex subunit 2-like. (1456 aa)    
Predicted Functional Partners:
washc1
WASH complex subunit 1.
    
 0.994
washc5
WASH complex subunit 5.
   
 0.990
ENSBSLP00000027102
annotation not available
    
 0.989
washc4
WASH complex subunit 4.
   
 0.988
capzb
Capping actin protein of muscle Z-line subunit beta.
    
 0.965
tbc1d23
TBC1 domain family member 23.
     
 0.922
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
   
 0.921
SNX27
Sorting nexin 27.
    
 0.851
LOC114865403
Sorting nexin-27-like.
    
 0.851
slf1
SMC5-SMC6 complex localization factor 1.
    
 0.838
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.