STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfand4Zinc finger AN1-type containing 4. (726 aa)    
Predicted Functional Partners:
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
0.999
rps27a
Ribosomal protein S27a.
   
 
0.999
mysm1
Myb like, SWIRM and MPN domains 1.
   
 0.997
katnal2
Katanin catalytic subunit A1 like 2.
    
 0.995
ubxn7
UBX domain protein 7.
    
 0.995
psmc5
Proteasome 26S subunit, ATPase 5.
   
 0.994
psmb1
Proteasome 20S subunit beta 1.
   
 0.994
psmc1
Proteasome 26S subunit, ATPase 1.
   
 0.994
psma2
Proteasome 20S subunit alpha 2.
   
 0.994
fancm
FA complementation group M.
   
 0.992
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.