STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114849214Calmodulin. (167 aa)    
Predicted Functional Partners:
RYR3
Ryanodine receptor 3-like.
    
 0.978
LOC114847608
Myosin light chain kinase, smooth muscle-like.
    
 0.972
CAMK2B
Calcium/calmodulin-dependent protein kinase type II subunit beta.
   
 0.947
LOC114855133
Voltage-dependent L-type calcium channel subunit alpha-1D-like.
    
 0.943
CACNA1D
Calcium voltage-gated channel subunit alpha1 D.
    
 0.943
LOC114862070
Voltage-dependent L-type calcium channel subunit alpha-1C-like.
    
 0.943
nos1
Nitric oxide synthase 1.
    
 0.933
PPP3CA
Protein phosphatase 3 catalytic subunit alpha.
    
 0.931
LOC114866502
Glutamate receptor ionotropic, NMDA 1.
    
 0.928
LOC114848822
Unconventional myosin-VI-like.
    
 0.914
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.