STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861342Lamina-associated polypeptide 2, isoforms beta/gamma-like. (489 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.700
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.695
LOC114854165
lamin-B2-like.
   
 0.675
lmnb1
Lamin B1.
   
 0.675
LOC114865304
lamin-A-like.
   
 0.675
LOC114865304-2
lamin-A-like.
   
 0.675
LOC114851961
lamin-L(III)-like.
   
 0.675
lmna
Lamin A/C.
   
 0.675
LOC114869172
Barrier-to-autointegration factor.
    
 0.662
LOC114842006
Barrier-to-autointegration factor-like.
    
 0.662
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.