STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114843860Xenotropic and polytropic retrovirus receptor 1 homolog. (691 aa)    
Predicted Functional Partners:
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
     
 0.885
LOC114857615
Phosphatidylcholine-sterol acyltransferase-like.
     
 0.722
LOC114856852
Group XV phospholipase A2-like.
     
 0.710
LOC114853256
Neuropathy target esterase-like.
     
 0.690
LOC114845687
Patatin-like phospholipase domain-containing protein 7.
     
 0.690
LOC114867048
Patatin-like phospholipase domain-containing protein 7.
     
 0.690
LOC114865943
Neuroligin-2-like.
     
 0.623
ache
Acetylcholinesterase (Cartwright blood group).
     
 0.623
LOC114863255
Crystal protein-like.
     
 0.623
LOC114868622
Cholinesterase-like.
     
 0.623
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.