STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861369L-lactate dehydrogenase B chain. (333 aa)    
Predicted Functional Partners:
LOC114864912
Malate synthase-like.
  
 0.959
cs
Citrate synthase.
  
 0.952
ubxn7
UBX domain protein 7.
    
 0.934
tsg101
Tumor susceptibility 101.
 
 
 
 0.933
got2
Glutamic-oxaloacetic transaminase 2.
   
 0.927
pc
Pyruvate carboxylase.
  
 0.921
LOC114857204
Pyruvate kinase PKM-like.
  
 0.909
LOC114851774
Pyruvate kinase PKM-like.
  
 0.909
LOC114842552
Pyruvate kinase PKM-like.
  
 0.909
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.907
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.