STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ST18ST18 C2H2C-type zinc finger transcription factor. (1012 aa)    
Predicted Functional Partners:
fasn
Fatty acid synthase.
     
 0.482
ENSBSLP00000013217
annotation not available
     
 0.482
LOC114853699
Phthioceranic/hydroxyphthioceranic acid synthase-like.
     
 0.482
LOC114853698
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsD-like.
     
 0.482
LOC114855749
Podocalyxin-like protein 2.
  
     0.473
herc1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.
   
   0.414
LOC114866632
Probable E3 ubiquitin-protein ligase HERC1.
   
   0.414
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.