STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861393Vesicle transport protein GOT1B-like. (187 aa)    
Predicted Functional Partners:
umps
Uridine monophosphate synthetase.
  
 
 0.981
dhodh
Dihydroorotate dehydrogenase (quinone).
  
 
 0.961
dpyd
Dihydropyrimidine dehydrogenase.
  
 
 0.961
LOC114857952
NADH-cytochrome b5 reductase 2-like.
  
 
 0.914
LOC114862533
NADH-cytochrome b5 reductase 3-like.
  
 
 0.914
oxnad1
Oxidoreductase NAD binding domain containing 1.
  
 
 0.914
uprt
Uracil phosphoribosyltransferase homolog.
  
 
 0.899
ephx2
Epoxide hydrolase 2.
  
 
 0.862
gmps
Guanine monophosphate synthase.
    
 0.821
NT5E
5'-nucleotidase-like.
    
 0.811
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.