STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114848469MAGUK p55 subfamily member 5-A-like. (685 aa)    
Predicted Functional Partners:
LOC114869045
Angiomotin-like.
    
 0.952
mpdz
Multiple PDZ domain crumbs cell polarity complex component.
    
 0.937
patj
PATJ crumbs cell polarity complex component.
    
 0.937
ENSBSLP00000043707
annotation not available
    
 0.937
LOC114857456
Partitioning defective 6 homolog alpha-like.
    
0.922
LOC114865870
Partitioning defective 6 homolog gamma-like.
    
0.908
pard6b
Par-6 family cell polarity regulator beta.
    
0.908
ENSBSLP00000019294
annotation not available
    
 0.898
ENSBSLP00000007810
Membrane protein, palmitoylated 4-like.
  
 
0.879
LOC114847054
MAGUK p55 subfamily member 4-like.
  
 
0.878
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.