STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setdb1SET domain bifurcated histone lysine methyltransferase 1. (1287 aa)    
Predicted Functional Partners:
atf7ip
Activating transcription factor 7 interacting protein.
   
 0.964
atf7ip2
Activating transcription factor 7 interacting protein 2.
   
 0.959
arl14ep
ADP ribosylation factor like GTPase 14 effector protein.
    
 
 0.915
suv39h1
Suppressor of variegation 3-9 homolog 1.
    
0.907
dot1l
DOT1 like histone lysine methyltransferase.
   
 0.888
LOC114856082
Histone-lysine N-methyltransferase SETMAR.
    
0.878
ENSBSLP00000034329
annotation not available
   
 0.870
LOC114855829
piggyBac transposable element-derived protein 3-like.
   
 0.870
LOC114848774
piggyBac transposable element-derived protein 3-like.
   
 0.870
ENSBSLP00000056757
annotation not available
   
 0.870
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.