STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankfy1Ankyrin repeat and FYVE domain containing 1. (1179 aa)    
Predicted Functional Partners:
vps29
VPS29 retromer complex component.
   
 0.974
vps35
VPS35 retromer complex component.
    
 0.968
snx17
Sorting nexin 17.
    
 0.953
snx12
Sorting nexin 12.
    
 0.951
LOC114856395
Sorting nexin-32-like.
    
 0.951
snx3
Sorting nexin 3.
    
 0.951
ENSBSLP00000013006
Sorting nexin 3.
    
 0.951
snx6
Sorting nexin 6.
    
 0.951
LOC114865838
Sorting nexin-10A-like.
    
 0.951
snx5
Sorting nexin 5.
    
 0.951
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.