STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndrg3NDRG family member 3. (361 aa)    
Predicted Functional Partners:
agpat3
1-acylglycerol-3-phosphate O-acyltransferase 3.
    
 0.427
agpat4
1-acylglycerol-3-phosphate O-acyltransferase 4.
    
 0.427
trpc4ap
Transient receptor potential cation channel subfamily C member 4 associated protein.
      
 0.422
LOC114841944
Regulator of microtubule dynamics protein 2-like.
    
 0.407
rmdn1
Regulator of microtubule dynamics 1.
    
 0.407
lclat1
Lysocardiolipin acyltransferase 1.
    
 0.407
rmdn3
Regulator of microtubule dynamics 3.
    
 0.401
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.