STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000047645annotation not available (490 aa)    
Predicted Functional Partners:
asmtl
Acetylserotonin O-methyltransferase like.
   
 
 0.486
LOC114860313
SUMO-conjugating enzyme UBC9-like.
    
  0.460
ube2i
Ubiquitin conjugating enzyme E2 I.
    
  0.460
kctd2
Potassium channel tetramerization domain containing 2.
    
  0.438
chd5
Chromodomain helicase DNA binding protein 5.
    
 0.404
chd3
Chromodomain helicase DNA binding protein 3.
    
 0.404
chd4
Chromodomain helicase DNA binding protein 4.
    
 0.404
LOC114866072
chromodomain-helicase-DNA-binding protein 4-like.
    
 0.404
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.