STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ascc1Activating signal cointegrator 1 complex subunit 1. (354 aa)    
Predicted Functional Partners:
ENSBSLP00000023127
annotation not available
    
 0.994
ascc2
Activating signal cointegrator 1 complex subunit 2.
    
 0.994
trip4
Thyroid hormone receptor interactor 4.
    
 0.935
ENSBSLP00000046310
PMS1 homolog 2, mismatch repair system component.
     
 0.932
ENSBSLP00000034562
BRCA2 DNA repair associated.
     
 0.931
ercc8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
     
 0.930
dclre1c
DNA cross-link repair 1C.
   
 
 0.929
pms1
PMS1 homolog 1, mismatch repair system component.
     
 0.927
msh6
mutS homolog 6.
   
 
  0.927
lig4
DNA ligase 4.
   
 
  0.926
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.