STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114854463Uricase-like. (276 aa)    
Predicted Functional Partners:
LOC114851942
5-hydroxyisourate hydrolase-like.
 
 
 0.958
ENSBSLP00000011354
Urate (5-hydroxyiso-) hydrolase b.
 
 
 0.957
aox1
Aldehyde oxidase 1.
  
 
 0.940
LOC114854024
Allantoinase, mitochondrial-like.
 
 
 0.888
kmo
Kynurenine 3-monooxygenase.
   
 
  0.828
LOC114864912
Malate synthase-like.
  
  
 0.821
sqle
Squalene epoxidase.
   
 
  0.802
coq6
Coenzyme Q6, monooxygenase.
   
 
  0.802
dpys
Dihydropyrimidinase.
  
 
 0.764
LOC114849222
Dihydropyrimidinase-related protein 5-like.
  
 
 0.715
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.