STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114867643Programmed cell death protein 10-like. (206 aa)    
Predicted Functional Partners:
mob4
MOB family member 4, phocein.
   
 0.965
fgfr1op2
FGFR1 oncogene partner 2.
    
 0.964
LOC114867941
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
    
 0.949
LOC114858992
CTTNBP2 N-terminal-like protein.
    
 0.943
cttnbp2nl
CTTNBP2 N-terminal like.
    
 0.943
ENSBSLP00000017055
annotation not available
    
 0.932
ccm2
CCM2 scaffold protein.
    
 
 0.910
slmap
Sarcolemma associated protein.
    
 
 0.895
strip2
Striatin interacting protein 2.
    
 0.888
strip1
Striatin interacting protein 1.
    
 0.888
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.