STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nup35Nucleoporin 35. (296 aa)    
Predicted Functional Partners:
nup155
Nucleoporin 155.
   
 0.999
nup85
Nucleoporin 85.
   
 0.998
nup210
Nucleoporin 210.
    
 0.998
nup43
Nucleoporin 43.
   
 0.998
nup205
Nucleoporin 205.
   
 0.998
LOC114846828
ranBP2-like and GRIP domain-containing protein 3.
    
 0.998
nup98
Nucleoporin 98.
   
 0.995
NUP54
Nucleoporin 54.
   
 0.995
nup50
Nucleoporin 50.
   
 0.994
NUP62
Nucleoporin 62.
    
 0.989
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.