STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sema4gSemaphorin 4G. (879 aa)    
Predicted Functional Partners:
mst1r
Macrophage stimulating 1 receptor.
    
 0.758
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.758
LOC114856141
Macrophage-stimulating protein receptor-like.
    
 0.758
nrp1
Neuropilin 1.
    
 0.717
LOC114855731
plexin-B1-like.
    
0.676
LOC114858967
plexin-B1-like.
    
0.676
LOC114858827
plexin-B1-like.
    
0.676
LOC114861760
plexin-B2-like.
    
 0.676
plxnb2
Plexin B2.
    
 0.676
LOC114855403
plexin-A1-like.
    
0.583
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.