STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmc1C-X9-C motif containing 1. (111 aa)    
Predicted Functional Partners:
LOC114847640
Cytochrome c oxidase copper chaperone.
   
  
 0.659
timm10
Translocase of inner mitochondrial membrane 10.
   
  
 0.643
LOC114846727
Cytochrome c oxidase assembly factor 5.
   
  
 0.603
pum2
Pumilio RNA binding family member 2.
    
   0.600
pum1
Pumilio RNA binding family member 1.
    
   0.600
LOC114845550
Cytochrome c oxidase assembly factor 3 homolog, mitochondrial.
   
 
 0.590
azi2
5-azacytidine induced 2.
      
 0.561
atp23
ATP23 metallopeptidase and ATP synthase assembly factor homolog.
      
 0.516
ccdc12
Coiled-coil domain containing 12.
      
 0.509
LOC114855674
Mitochondrial intermembrane space import and assembly protein 40-like.
   
 
 0.492
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.