STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wnk4Vacuolar protein sorting 25 homolog. (1463 aa)    
Predicted Functional Partners:
med14
Mediator complex subunit 14.
    
 0.895
med17
Mediator complex subunit 17.
    
 0.895
med7
Mediator complex subunit 7.
    
 0.884
med6
Mediator complex subunit 6.
    
 0.872
med31
Mediator complex subunit 31.
    
 0.868
med21
Mediator complex subunit 21.
    
 0.859
LOC114865887
Mediator of RNA polymerase II transcription subunit 10.
    
 0.772
med10
Mediator complex subunit 10.
    
 0.772
LOC114862872
Calcium-independent phospholipase A2-gamma-like.
    
 0.726
LOC114857414
Calcium-independent phospholipase A2-gamma-like.
    
 0.726
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.