STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857009Gastricsin-like. (387 aa)    
Predicted Functional Partners:
LOC114870387
Alpha-1-antitrypsin-like protein GS55-MS.
    
 0.811
LOC114864300
Cathepsin F-like.
   
 0.759
ctso
Cathepsin O.
   
 0.750
ctsc
Cathepsin C.
   
 0.739
ctsh
Cathepsin H.
   
 0.708
atp6ap2
ATPase H+ transporting accessory protein 2.
   
 0.692
LOC114852126
Cathepsin B-like.
   
 0.672
LOC114849798
Cathepsin B-like.
   
 0.672
ctsa
Cathepsin A.
   
 0.643
LOC114852309
Lysosomal protective protein-like.
   
 0.643
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.