STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tax1bp1Tax1 binding protein 1. (840 aa)    
Predicted Functional Partners:
tnfaip3
TNF alpha induced protein 3.
    
 0.984
azi2
5-azacytidine induced 2.
    
 
 0.913
gabarapl2
GABA type A receptor associated protein like 2.
   
 0.895
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.895
LOC114864912
Malate synthase-like.
   
 
 0.890
LOC114842980
Gamma-aminobutyric acid receptor-associated protein-like 1.
   
  0.886
ENSBSLP00000004992
TANK-binding kinase 1.
    
 0.878
traf6
TNF receptor associated factor 6.
    
 0.857
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.857
LOC114865730
Tax1-binding protein 1 homolog A-like.
  
  
 
0.842
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.