STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000048600annotation not available (1130 aa)    
Predicted Functional Partners:
fancm
FA complementation group M.
    
 0.940
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
 
 0.789
cenpt
Centromere protein T.
    
 0.560
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.560
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.559
LOC114851763
Histone-binding protein RBBP7.
    
 0.523
rbbp4
RB binding protein 4, chromatin remodeling factor.
    
 0.523
fancf
FA complementation group F.
    
  0.503
fancg
FA complementation group G.
    
  0.503
fancl
FA complementation group L.
    
  0.503
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.