STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114868593Lysosomal amino acid transporter 1 homolog. (308 aa)    
Predicted Functional Partners:
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
     
 0.741
SPR
Sepiapterin reductase.
    
  0.711
LOC114861985
Sepiapterin reductase-like.
    
  0.711
pdhb
Pyruvate dehydrogenase E1 beta subunit.
     
 0.604
amdhd1
Amidohydrolase domain containing 1.
   
 
  0.597
gda
Guanine deaminase.
   
 
  0.597
LOC114870369
Carbonyl reductase [NADPH] 1-like.
    
  0.576
LOC114870370
Carbonyl reductase [NADPH] 1-like.
    
  0.576
ENSBSLP00000004357
Cystinosin, lysosomal cystine transporter.
    
 
 0.412
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.