STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114867647Dynein regulatory complex subunit 3-like. (232 aa)    
Predicted Functional Partners:
prpf31
pre-mRNA processing factor 31.
     
 0.808
prpf3
pre-mRNA processing factor 3.
     
 0.808
prpf6
pre-mRNA processing factor 6.
     
 0.743
eftud2
Elongation factor Tu GTP binding domain containing 2.
     
 0.710
als2
Alsin Rho guanine nucleotide exchange factor ALS2.
   
   0.567
LOC114847070
Alsin-like.
   
   0.567
prpf8
pre-mRNA processing factor 8.
     
 0.477
NEK9
NIMA related kinase 9.
    
 
 0.453
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.