STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
col19a1Collagen type XIX alpha 1 chain. (666 aa)    
Predicted Functional Partners:
ENSBSLP00000048699
annotation not available
 
      0.856
ENSBSLP00000033371
annotation not available
 
  
 0.852
ENSBSLP00000010161
annotation not available
 
  
 0.644
LOC114855982
Complement C1q subcomponent subunit C-like.
  
 
0.599
tep1
Telomerase associated protein 1.
    
 0.588
LOC114847453
Collagen alpha-2(VI) chain-like.
  
 
0.526
col6a2
Collagen type VI alpha 2 chain.
  
 
0.523
ENSBSLP00000030956
annotation not available
  
     0.518
ENSBSLP00000037368
annotation not available
 
   
 0.494
ENSBSLP00000050298
Collagen, type VI, alpha 1.
  
0.491
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.