STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114870365Pyridoxal kinase-like. (316 aa)    
Predicted Functional Partners:
pnpo
Pyridoxamine 5'-phosphate oxidase.
    
 0.906
pdxp
Pyridoxal phosphatase.
    
 0.869
aox1
Aldehyde oxidase 1.
     
 0.852
iah1
Isoamyl acetate hydrolyzing esterase 1 (putative).
   
 0.851
LOC114847665
Pyridoxal kinase-like.
  
  
 
0.840
plpbp
Pyridoxal phosphate binding protein.
  
  
 0.727
skp1
S-phase kinase associated protein 1.
    
 
 0.713
fdx1
Ferredoxin 1.
    
 0.705
fdx2
Ferredoxin 2.
    
 0.705
pgp
Phosphoglycolate phosphatase.
    
 0.700
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.