STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000049143annotation not available (372 aa)    
Predicted Functional Partners:
c9h12orf45
Chromosome 9 C12orf45 homolog.
      
 0.528
vps13a
Vacuolar protein sorting 13 homolog A.
      
 0.428
LOC114853674
Uncharacterized LOC114853674.
  
     0.422
ASTN2
Astrotactin 2.
      
 0.418
rnf145
Ring finger protein 145.
      
 0.406
LOC114848028
RING finger protein 145-like.
      
 0.406
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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