STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000049276Leucine rich repeat containing 34. (308 aa)    
Predicted Functional Partners:
LOC114860524
Tetratricopeptide repeat protein 30A-like.
   
    0.749
rsph14
Radial spoke head 14 homolog.
    
 
 0.644
dlec1
DLEC1 cilia and flagella associated protein.
    
 
 0.578
cfap161
Cilia and flagella associated protein 161.
   
  
 0.571
LOC114863911
Serine/arginine repetitive matrix protein 1-like.
    
 
 0.538
LOC114869969
Protein INSYN2B-like.
    
 
 0.538
lrrc23
Leucine rich repeat containing 23.
   
  
 0.537
ccdc146
Coiled-coil domain containing 146.
     
 0.536
LYPD6
LY6/PLAUR domain containing 6.
      
 0.521
cfap52
Cilia and flagella associated protein 52.
   
 
 0.498
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.