STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pabpn1poly(A) binding protein nuclear 1. (292 aa)    
Predicted Functional Partners:
cstf2
Cleavage stimulation factor subunit 2.
  
0.966
papolg
poly(A) polymerase gamma.
   
 0.960
acin1
Apoptotic chromatin condensation inducer 1.
   
 0.947
sap18
Sin3A associated protein 18.
   
 0.929
eif4a3
Eukaryotic translation initiation factor 4A3.
   
 0.922
rbm8a
RNA binding motif protein 8A.
  
 0.915
dhx9
DExH-box helicase 9.
   
 0.914
ncbp2
Nuclear cap binding protein subunit 2.
    
 0.899
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 0.899
LOC114860289
pre-mRNA 3'-end-processing factor FIP1-like.
   
 0.893
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.