STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mms19MMS19 homolog, cytosolic iron-sulfur assembly component. (995 aa)    
Predicted Functional Partners:
ciao2b
Cytosolic iron-sulfur assembly component 2B.
    
 0.998
ciao1
Cytosolic iron-sulfur assembly component 1.
    
 0.997
ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.997
ciao2a
Cytosolic iron-sulfur assembly component 2A.
    
 0.996
ercc3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.970
ndor1
NADPH dependent diflavin oxidoreductase 1.
    
 0.970
brip1
BRCA1 interacting protein C-terminal helicase 1.
    
 0.968
rtel1
Regulator of telomere elongation helicase 1.
    
 0.968
ddx11
DEAD/H-box helicase 11.
    
 0.965
ciapin1
Cytokine induced apoptosis inhibitor 1.
     
 0.953
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.