STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114846854Neuropilin-2-like. (952 aa)    
Predicted Functional Partners:
fech
Ferrochelatase.
  
 
 0.789
LOC114842936
Copper-transporting ATPase 2-like.
  
 
 0.763
atp7a
ATPase copper transporting alpha.
  
 
 0.763
FXN
Frataxin.
     
 0.761
pros1
Protein S.
   
 0.752
aasdh
Aminoadipate-semialdehyde dehydrogenase.
     
 0.739
ggnbp2
Gametogenetin binding protein 2.
    
 0.723
LOC114856113
Cytochrome c1, heme protein, mitochondrial.
     
 0.722
slc40a1
Solute carrier family 40 member 1.
    
 0.721
LOC114843090
Solute carrier family 40 member 1-like.
    
 0.721
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.