STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114843437Cytochrome P450 4B1-like. (466 aa)    
Predicted Functional Partners:
LOC114862387
Cytochrome P450 2U1.
  
0.865
hsd17b7
Hydroxysteroid 17-beta dehydrogenase 7.
    
 0.864
lss
Lanosterol synthase.
   
 0.860
pla2g4a
Phospholipase A2 group IVA.
   
 0.853
asmtl
Acetylserotonin O-methyltransferase like.
     
 0.850
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.847
LOC114862682
Cytochrome P450 1A1-like.
  
 0.841
LOC114846450
Cytochrome P450 26A1.
  
  
0.839
LOC114846262
Cytochrome P450 26B1.
  
  
0.839
suox
Sulfite oxidase.
    
 0.835
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.