STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114842185Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2-like. (626 aa)    
Predicted Functional Partners:
flad1
Flavin adenine dinucleotide synthetase 1.
  
 0.998
LOC114854773
Elongation factor 1-alpha-like.
 
   
 0.944
LOC114860693
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.
 
   
 0.944
EEF1A1
Elongation factor 1-alpha 1-like.
 
   
 0.944
LOC114865312
Elongation factor 1-alpha.
 
   
 0.944
GSPT1
G1 to S phase transition 1.
 
   
 0.944
LOC114856117
Elongation factor 1-alpha 1.
 
   
 0.943
suox
Sulfite oxidase.
     
 0.925
sdha
Succinate dehydrogenase complex flavoprotein subunit A.
    
 0.907
impad1
Inositol monophosphatase domain containing 1.
  
 
 0.906
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.