STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pole2DNA polymerase epsilon 2, accessory subunit. (526 aa)    
Predicted Functional Partners:
pole4
DNA polymerase epsilon 4, accessory subunit.
    
 0.999
pole3
DNA polymerase epsilon 3, accessory subunit.
    
 0.999
ENSBSLP00000030016
Polymerase (DNA directed), epsilon.
   
 0.999
pola1
DNA polymerase alpha 1, catalytic subunit.
   
 0.998
mcm4
Minichromosome maintenance complex component 4.
   
 0.997
mcm3
Minichromosome maintenance complex component 3.
   
 0.996
pold1
DNA polymerase delta 1, catalytic subunit.
   
 0.996
mcm5
Minichromosome maintenance complex component 5.
   
 0.995
mcm6
Minichromosome maintenance complex component 6.
   
 0.995
ero1a
Endoplasmic reticulum oxidoreductase 1 alpha.
   
 
 0.994
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.