STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857141Sodium/nucleoside cotransporter 1-like. (654 aa)    
Predicted Functional Partners:
TYMP
Thymidine phosphorylase.
  
  
 0.790
LOC114850449
Cytidine deaminase-like.
  
  
 0.700
tyms
Thymidylate synthetase.
     
 0.629
NT5E
5'-nucleotidase-like.
  
  
 0.626
dera
Deoxyribose-phosphate aldolase.
  
  
 0.600
helb
DNA helicase B.
  
  
 0.600
gart
annotation not available
      
 0.577
hddc2
HD domain containing 2.
      
 0.533
LOC114856031
Natural resistance-associated macrophage protein 2-like.
     
 0.525
LOC114857677
Pseudouridine-metabolizing bifunctional protein C1861.05-like.
     
 0.507
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.