STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35f6Solute carrier family 35 member F6. (377 aa)    
Predicted Functional Partners:
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
  
 
 0.679
faf2
Fas associated factor family member 2.
   
  
 0.550
slc35b2
Solute carrier family 35 member B2.
      
 0.542
xpnpep1
X-prolyl aminopeptidase 1.
    
 0.528
fastkd3
FAST kinase domains 3.
    
 0.528
pepd
Peptidase D.
    
 0.528
ENSBSLP00000038182
X-prolyl aminopeptidase 3, mitochondrial.
    
 0.528
xpnpep2
X-prolyl aminopeptidase 2.
    
 0.528
slc35b4
Solute carrier family 35 member B4.
      
 0.525
rars2
arginyl-tRNA synthetase 2, mitochondrial.
    
 0.523
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.