STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cotl1Coactosin like F-actin binding protein 1. (232 aa)    
Predicted Functional Partners:
LOC114855575
Arachidonate 15-lipoxygenase B-like.
    
 
 0.798
LOC114863291
Hydroperoxide isomerase ALOXE3-like.
    
 
 0.738
immt
Inner membrane mitochondrial protein.
    
 0.714
cap2
Cyclase associated actin cytoskeleton regulatory protein 2.
   
 
 0.708
cap1
Cyclase associated actin cytoskeleton regulatory protein 1.
   
 
 0.708
capzb
Capping actin protein of muscle Z-line subunit beta.
   
 0.699
ENSBSLP00000045759
annotation not available
    
 
 0.695
gak
Cyclin G associated kinase.
   
 
 0.692
actr2
Actin related protein 2.
   
 0.598
LOC114842713
Actin-related protein 2-like.
   
 0.593
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.