STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fcf1FCF1 rRNA-processing protein. (184 aa)    
Predicted Functional Partners:
nop14
NOP14 nucleolar protein.
   
 0.999
pdcd11
Programmed cell death 11.
   
 0.999
nop58
NOP58 ribonucleoprotein.
   
 0.999
ENSBSLP00000011755
UTP14C small subunit processome component.
   
 0.999
rps6
Ribosomal protein S6.
    
 0.999
utp20
UTP20 small subunit processome component.
   
 0.999
aatf
Apoptosis antagonizing transcription factor.
   
 0.999
wdr46
WD repeat domain 46.
   
 0.999
rps9
Ribosomal protein S9.
   
 0.999
nol6
Nucleolar protein 6.
   
 0.999
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.